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Species belonging to selected taxon:

Sparus aurata



ABOUT THIS RECORD

ID: MNEST009027
species: Sparus aurata
miRNA family: miR-1814c
source: miRNEST

Taxonomy by NCBI:
Sparus aurata Sparus Sparidae Percoidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTTGTTTGGTTTTGTTTTT

miRNA*
GAAAAAAATCTATATTGGAAAA

mismatches: 4
bulges: 1

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pre-miRNA
TTGGAAATTAAAGAAAAAAATCTATATTGGAAAAGAAATTGTCTGGCCTCTCAATGCGGCCTCGCCTTGACCGGGTCTTGAGTTTGGCCTCTTTGGTGGT
GTCAAGCAATTTTTTTTTTTGTTTGGTTTTGTTTTTTGNCTCTAA


dot-bracket secondary structure
.((((...(((((((.((((((...((.((((((((((((((.((((((.((((...((((..((...(((...)))....))..))))...)))).)).
)))).)))))))))))))).))..)))))).)))))))..)))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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